Lizarraga Lab, Brown University
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RESEARCH DESCRIPTION


Impairments of neuronal circuit formation during cortical development have been proposed as a major cause of neurodevelopmental disorders such as autism, epilepsy and intellectual disability.  Severe forms of autism are co-morbid with intellectual disability, difficult to treat epilepsy and non-verbal status, and affect about 30% of patients diagnosed with autism. There are to date no current effective bio-therapeutics to treat patients affected by severe autism. Using a combination of genome edited and patient derived induced pluripotent stem cells (iPSCs), we hope to gain a better understanding of the underlying mechanisms that could eventually lead to the development of much needed therapeutics for difficult to treat autism.

ASH1L's connection to autism spectrum disorders

Differences in levels of the ASH1L gene, an epigenetic histone methyltransferase, has been found to be associated with ASD characteristics. ASH1L expression is believed to be linked to increased levels of transcriptional activation while an antagonistic class of histone modifiers, known as the Polycomb Repressive Complex 2 group (PRC2), have been shown to repress transcriptional activation. It is believed that when ASH1L is under-expressed, as may be the case in ASD due to the presence of mutations or other complications in genetic coding, the PRC2 group may be responsible for over-repressing important genetic transcription necessary for typical development. Our lab is studying how mutations in coding regions of the ASH1L gene can potentially lead to genotypical and phenotypical changes in developing neurons, modeling how natural early neurological development may go awry.

Endosomal Signaling in autism and intellectual disability
The establishment of neuronal circuitry during development depends on the careful orchestration of several cellular processes, including proper neuronal arborization and formation of functional synapses in response to neuronal activity. One major focus of our research will be the study of endosomal signaling in neuronal morphogenesis and synaptogenesis. The endosomal machinery controls receptor trafficking, recycling, degradation, and modulates signaling pathways important for neuronal growth, arborization, and synaptogenesis. Using genome-editing approaches in human iPSCs, we are targeting endosomal proteins that have been associated with autism and intellectual disability. With this approach we hope to further elucidate common mechanisms in disorders of neuronal connectivity. 

Gene-environment interaction in autism spectrum disorders

Autism spectrum disorders (ASD) are highly heritable. However, a significant proportion of ASD cases are of complex genetic etiology, an indication that this complexity might reflect the impact of gene-environment interactions. Genetic findings suggest that there is an overrepresentation of chromatin regulatory genes associated with autism. This suggests that environmental risk factors for ASD might exert their effect by modulating epigenetic mechanisms that alter neuronal development. We are using genome-editing approaches in human stem cells to determine the neuronal function of chromatin regulatory factors that have been previously associated with higher risk variants in ASD.

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